Antigen

Antigen Class

TFs and others

Antigen

CTCF

Cell type

Cell type Class

Neural

Cell type

LN-229

Primary Tissue

Brain

Tissue Diagnosis

Glioma

Sample

source_name

tumorigenic adherent glioma cell line (LN229)

cell type

tumorigenic adherent glioma cell line (LN229)

chip antibody

CTCF (#3418, Cell Signaling)

treatment

Treated with CrispR Cas9 Control sgRNA

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

9557518

Reads aligned (%)

98.3

Duplicates removed (%)

1.9

Number of peaks

1806 (qval < 1E-05)

hg19

Number of total reads

9557518

Reads aligned (%)

97.8

Duplicates removed (%)

2.9

Number of peaks

1921 (qval < 1E-05)